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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811537.1_cds_XP_016496750.1_10939
CDS Infomation

[gene=LOC107815650] [db_xref=GeneID:107815650] [protein=LRR receptor-like serine/threonine-protein kinase EFR] [protein_id=XP_016496750.1] [location=join(7919..8831,9741..9956,10044..12020,12106..12461)] [gbkey=CDS]
Sequence

ATGAGGACATCATTACTGGAGAAAACCTCCTCTTCTCAGCTTCTAGCATTTTCGTTATTT
TTTCACTCATGCTTAGCCATGAATATCAGCACTGATCAATCTTCTCTTCTAGCCTTGAAA
GCCCACATCACTTCAGACCCTTATCGCATTCTTTCAACAAACTGGTCTTCTTCTACCTCT
GTTTGTAGCTGGATTGGAATCGCTTGTGGCTCTCGTCATCATAGAGTGATTAAACTGAAT
ATTTCAGACATGGGGTTTACTGGTACCATCCCACCACAACTTGGCAACCTTTCTTTTCTT
ATTTCTCTTGATCTAAGCTACAACAATTTCCAGGGTGAACTTCCACCAGAGTTCACTCGT
TTGGAAAAGTTGAGAACCATTAATCTTAGTTTCAACAACTTCACTGGAGAAATTCCTAAA
TTTCTAGGTGATTTACAAGACCTTCAAATGTTCGCCATTGAAAACAATAGTTTCAGTGGG
TTCATTCCTTCTTCTATCGCAAACATGAAGAATCTTGGATTCCTTAATTTAAGATACAAC
AATCTGGAAGGAAATATTCCTTTAGGAATAGCCACTCTTCAGAGTTTGAAATGGTTAAGC
TTTGGATTCAATAAGCTCAATGGCTCTAATGTGCTCTCCATATTTAACATCTCGACACTG
GAATATTTGGATCTCGGAAATGCCGGTTTAACTGATGATCTTCCATCTGATTTGTGTCGT
CGCCTTCCAAGATTGCAAAGGCTTGGACTTAACTTCAACATGTTAAGTGGAGAGATACCA
AGAAGTATATCAGAATGCTCGGAACTTCAAGTCCTATTGTTGTTGCAAAATAACTTGATT
GGAGCAATTCCAAGACAACTTGGGAAATTACAGCTGCTGCAAATCTTAGCTCTTGGGTTT
AACAAATTACAAGGCACAATTCCTGATGAGATTGGTCATCTTTATAACTTGAAGCAATTG
GGCATGGAAAAAAATAAATTAACGGGCTCAATTCCTTTAACCATATTCAACATTTCATCA
CTTCAAGTTTTATCAATGTGGGACAACAAGCTTGAAGGACCTCTACCGAGAGAGGTCGGA
AATTTGACTATGCTTAATGTACTTGATCTGGGAGTCAATAACCTCACAGGTGTACTTCCA
GATGAGATCGGTAACCTTCAACAGTTGCTGCAGCTTAAGTTGGATTTCAATACCTTTAGT
GGGTCGATCCCTGCTAGTATCTTCAATATGTCAAGTCTTGTATCTATTTCACTCACACAA
AACCACATTTCAGGTAATCTTCCTTCCACTATAGGCCATAGATTACCCGATCTTGAACGA
ATTTTTCTAGGTGCGAACAACATTAATGGCTTTTTACCTAGTTCTATCTCAAATTTGTCT
AAGCTTACCATTCTCGAACTCAGTGCAAATGAACTCACAGGTTCAGTTCCTGACTCTCTA
GGAAACTTAAGATTTATTGAAATTCTCAACTTGCAAGACAACTCCTTTACTAGTGAATCT
TCACCACTGAGCTTTATTACTCCTTTGGCCAATTGTAAACACTTGAGAGAATTGATATTG
TCTCTTAATCCCCTAAATGCAATGCTTCCAAAGTCCATCGGCAATCTTTCTTCTCTTCAA
ATATTTGAGGCAGATGGATGTAACCTCAGGGGCCATGTTCCCATTGAAATCGGATATTTG
AGAAATTTATCTTATTTGAAGCTGGAAGACAATGACTTGACTGGCATTGTCCCCAGAACA
ATAAGTTCTTTGAAAAAACTTCAACAGTTTTCACTTGGAGCAAACAAAATAAGTGGTCCT
TTCCCGAATGGTTTGTGTGAGCTATCCAACTTGGGTTTGTTAAACCTTTCACAAAATCAA
ATGCAGGGAAGTATTCCTCGATGCTTGGGGGATGTAACTTCCCTAAGGGAGGTTTATCTT
GATTCCAACAGCTTCACCGCTGGCATACCTTCAAGTCTGTGGAACCTCAAAGACATCTTG
AAGCTGAACTTGTCTTCTAATATCTTCAATGGCTCTTTACCACTTGAAGTTGGAAACCTC
AAGGCTGCAATAATTCTAGATCTTTCCTGGAACCAAATCTCAGGCAACATTCCTAATACA
TTAGGAAGTCTACAGAAATTGACTCAACTGTCTTTAGCTCATAACAGGATTGAAGGATCT
ATTCCTGAGACATTTGGAGAACTGATAAATTTGGAAGCATTGGATCTTTCATATAATAAT
ATGTCTGGTGTTATTCCAAAGTCATTAGAGGCACTTAAGCAACTAGACTCCTTTAATGTC
TCATTCAATAGGTTACACGGGGAAATTCCAAATGGAGGACCTTTTGCTGATCTCCCTTAC
CAGTCTTTTGTGTCAAACGAAGGATTATGTGGTAACCCTCAAATGCATGTCCAGGCCTGT
CATGGTAAATCAAAGAAAAGAATCGTGATATTTATCGTCGTTGTCTCTTCTGTTATTGCT
TTAGTAGGCCTTGCTTCAGTGATAGTTTTCATGTTGAAGAGACGTCATGGTAAAACAATC
AAAGCTGATGATGAGTGGTTGCTAGATGTAGCACCACAAAGATTTTCCTATTATGATCTT
CAAAGAGCAACTCGGGACTTTGATGGAAACAACTTGCTAGGTAGTGGAAGTTTTGGTTCT
GTTTACAAGGGGGCATTAACAGATGGGATGATTGTAGCTGTTAAAGTTTTCAATGTGCAG
ATGGAAGGTACATTTCAAACCTTTGATAGAGAATGTGAAATTTTGCGGAATCTTCGTCAC
AGAAATCTCACCAAGATCATTAGCAGCTGTTGTAAGTTGGATTTTAAAGCATTGGTACTT
GAGTACATGCCAAATGAGAGCTTAGACAAGTTGCTATATTCTCGAGATTATTTTTTAAAC
ATAAAGCAAAGATTGAATATCATGCTTGATGTTGCATCTGCTCTGGAATATCTCCATCAT
AGTTACTCGGTACCTGTTATTCACTGTGATCTGAAGCCTAGTAACGTCTTGCTTGACAAA
GACATGGTGGGACACCTGACTGACTTTGGCATTGCAAAACTCTTAACAAAAGAAGAATCC
ATTGCTCATACTACAACCTTTGCCACAATTGGTTACATTGCCCCAGAGTATGGACTGGAA
GGTCTTATATCCAAGAGGTCTGATGTTTATAGTTATGGTATCATGTTGCTGGAAACTTTT
ACAAAGAAGAAACCTAACGATGAAATGTTCACGGGAGATTTGGATTTGAGAAGCTTTGTG
CATAATTCACTTCCTGATAAGCTGGATCAAATCATAGATGGCGACTTACTAACACTAGAT
GACGAAAACATAAGTGAAAAGTTGCAATGTGTGGCATCAGTTATGGAGTTAGCCATGAAT
TGCACAGCTAAATCTCCTGGTGAAAGGATGAACATGACTGATGTTGTAGCAGCATTGAAA
AAGATCAAAGATCGGCTTTCTTCCTATTATGGAACGACCTAA

Peptide Sequence

PEP ID

XP_016496750.1
PEP Infomation

PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Nicotiana tabacum]
Sequence

MRTSLLEKTSSSQLLAFSLFFHSCLAMNISTDQSSLLALKAHITSDPYRILSTNWSSSTS
VCSWIGIACGSRHHRVIKLNISDMGFTGTIPPQLGNLSFLISLDLSYNNFQGELPPEFTR
LEKLRTINLSFNNFTGEIPKFLGDLQDLQMFAIENNSFSGFIPSSIANMKNLGFLNLRYN
NLEGNIPLGIATLQSLKWLSFGFNKLNGSNVLSIFNISTLEYLDLGNAGLTDDLPSDLCR
RLPRLQRLGLNFNMLSGEIPRSISECSELQVLLLLQNNLIGAIPRQLGKLQLLQILALGF
NKLQGTIPDEIGHLYNLKQLGMEKNKLTGSIPLTIFNISSLQVLSMWDNKLEGPLPREVG
NLTMLNVLDLGVNNLTGVLPDEIGNLQQLLQLKLDFNTFSGSIPASIFNMSSLVSISLTQ
NHISGNLPSTIGHRLPDLERIFLGANNINGFLPSSISNLSKLTILELSANELTGSVPDSL
GNLRFIEILNLQDNSFTSESSPLSFITPLANCKHLRELILSLNPLNAMLPKSIGNLSSLQ
IFEADGCNLRGHVPIEIGYLRNLSYLKLEDNDLTGIVPRTISSLKKLQQFSLGANKISGP
FPNGLCELSNLGLLNLSQNQMQGSIPRCLGDVTSLREVYLDSNSFTAGIPSSLWNLKDIL
KLNLSSNIFNGSLPLEVGNLKAAIILDLSWNQISGNIPNTLGSLQKLTQLSLAHNRIEGS
IPETFGELINLEALDLSYNNMSGVIPKSLEALKQLDSFNVSFNRLHGEIPNGGPFADLPY
QSFVSNEGLCGNPQMHVQACHGKSKKRIVIFIVVVSSVIALVGLASVIVFMLKRRHGKTI
KADDEWLLDVAPQRFSYYDLQRATRDFDGNNLLGSGSFGSVYKGALTDGMIVAVKVFNVQ
MEGTFQTFDRECEILRNLRHRNLTKIISSCCKLDFKALVLEYMPNESLDKLLYSRDYFLN
IKQRLNIMLDVASALEYLHHSYSVPVIHCDLKPSNVLLDKDMVGHLTDFGIAKLLTKEES
IAHTTTFATIGYIAPEYGLEGLISKRSDVYSYGIMLLETFTKKKPNDEMFTGDLDLRSFV
HNSLPDKLDQIIDGDLLTLDDENISEKLQCVASVMELAMNCTAKSPGERMNMTDVVAALK
KIKDRLSSYYGTT

Transcript Sequence

Gene sequence data has not been registered.